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Courses
Methods in Bioinformatics
Lecture 1-3: Introduction to Python
Python Basics Part 1: Variables, For loops, If statements [go to Google Colab]
Python Basics Part 2: Functions and objects [go to Google Colab]
Python Basics Part 3: Pandas, Numpy and Dataframes [go to Google Colab]
Python Basics Part 4: Plotting data with matplotlib [go to Google Colab]
Excercise 1: Analyse E. coli growth curves [go to Google Colab]
Growth data of 12 E. coli strains:
Excercise 2: Metabolome data of E. coli [go to Google Colab]
Targeted metabolomics data of E. coli in 19 conditions:
Dataset 1
Dataset 2
Lecture 4: CRISPR screens
Part 1: Read fastq files [go to Google Colab]
Part 2: Analyse Data from CRISPR screen [go to Google Colab]
This is the CRISPR library and data:
And info about metabolic genes:
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